ANDS Services - Demonstration Environment - development

Dataset

The Cancer Genome Atlas NGS datasets - Australian Mirror

med.data.edu.au
Dr Jason Wong (Managed by)
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft.title=The Cancer Genome Atlas NGS datasets - Australian Mirror&rft.publisher=med.data.edu.au&rft.description=Next-generation sequencing (NGS) datasets from The Cancer Genome Atlas (TCGA - http://cancergenome.nih.gov/), includes mirrored data from CGHub (https://cghub.ucsc.edu/) and other processed data generated from original BAM files.  The data has been generated by The Cancer Genome Atlas (TCGA) consortium and made available to researchers for use in their research projects in a largely unrestricted manner. The main goal for storing this data in Australia is to provide a mirror of the TCGA large sequencing datasets so that it can be operated on directly using state and national HPC facilities and to ensure that the datasets are no unnecessarily re-download from the USA by different research groups.&rft.creator=Anonymous&rft.date=2015&rft_rights=&rft_subject=Cancer Genetics&rft_subject=Medical and Health Sciences&rft_subject=Oncology and Carcinogenesis&rft.type=dataset&rft.language=English Go to Data Provider

Please use the contact information below to request access to this data.

Licence & Rights:

No Licence view details
No licence

Access:

Conditions apply view details

Access to the raw data is restricted by the dbGap authorized access. Essentially access is granted for laboratories after an application justifying the intended use for the data.
https://dbgap.ncbi.nlm.nih.gov/aa/wga.cgi?page=login

Contact Information

jason.wong@unsw.edu.au Information regarding access to the mirrored dataset can be obtained by contacting Dr Jason Wong.

Brief description

Next-generation sequencing (NGS) datasets from The Cancer Genome Atlas (TCGA - http://cancergenome.nih.gov/), includes mirrored data from CGHub (https://cghub.ucsc.edu/) and other processed data generated from original BAM files. 

The data has been generated by The Cancer Genome Atlas (TCGA) consortium and made available to researchers for use in their research projects in a largely unrestricted manner.

The main goal for storing this data in Australia is to provide a mirror of the TCGA large sequencing datasets so that it can be operated on directly using state and national HPC facilities and to ensure that the datasets are no unnecessarily re-download from the USA by different research groups.

Subjects

User Contributed Tags    

Login to tag this record with meaningful keywords to make it easier to discover